ZooMir::Show

Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.

all known pre-mir class in Fugu rubripes species.
Index	ID	Class	Mature miRNA (MatMiR)	Match/ MatMiR Length	Chrom	Strand	MatMiR Position	PreMir Position	Confidence	Evo_ Source	Species_ No	Distribution
1	fru-mir-18	mir-18	fru-miR-18	22/22	scaffold_1	+	7-28	N/A	-	miRBase_13_0	24/37	4/57
2	fru-mir-17-1	mir-17	fru-miR-17	22/22	scaffold_1	+	14-35	N/A	-	miRBase_13_0	23/41	6/78
3	fru-mir-92-2	mir-92	fru-miR-92	22/22	scaffold_1	+	38-59	N/A	-	miRBase_13_0	47/65	3/170
4	fru-mir-19b	mir-19	fru-miR-19b	23/23	scaffold_1	+	40-62	N/A	-	miRBase_13_0	25/43	6/128
5	fru-mir-19a	mir-19	fru-miR-19a	23/23	scaffold_1	+	49-71	N/A	-	miRBase_13_0	25/43	6/128
6	fru-mir-124-3	mir-124	fru-miR-124	22/22	scaffold_10	+	52-73	N/A	-	miRBase_13_0	47/65	8/135
7	fru-mir-10b-1	mir-10	fru-miR-10b	23/23	scaffold_100	-	6-28	N/A	-	miRBase_13_0	43/59	7/124
8	fru-mir-148	mir-148	fru-miR-148	22/22	scaffold_100	-	49-70	N/A	-	miRBase_13_0	14/26	1/45
9	fru-mir-20	mir-20	fru-miR-20	23/23	scaffold_103	-	9-31	N/A	-	miRBase_13_0	24/42	4/98
10	fru-mir-17-2	mir-17	fru-miR-17	22/22	scaffold_103	-	14-35	N/A	-	miRBase_13_0	23/41	6/78
11	fru-mir-92-1	mir-92	fru-miR-92	22/22	scaffold_103	-	49-70	N/A	-	miRBase_13_0	47/65	3/170
12	fru-mir-129-1	mir-129	fru-miR-129	22/22	scaffold_104	+	14-35	N/A	-	miRBase_13_0	14/32	4/69
13	fru-mir-7	mir-7	fru-miR-7	21/21	scaffold_11	+	18-38	N/A	-	miRBase_13_0	46/63	2/143
14	fru-mir-23b	mir-23	fru-miR-23b	22/22	scaffold_11	+	45-66	N/A	-	miRBase_13_0	22/39	6/78
15	fru-mir-27b	mir-27	fru-miR-27b	22/22	scaffold_11	+	49-70	N/A	-	miRBase_13_0	22/38	6/81
16	fru-mir-30c	mir-30	fru-miR-30c	22/22	scaffold_113	+	9-30	N/A	-	miRBase_13_0	21/38	7/186
17	fru-mir-210	mir-210	fru-miR-210	22/22	scaffold_119	-	55-76	N/A	-	miRBase_13_0	33/43	2/62
18	fru-mir-196a-2	mir-196	fru-miR-196a	22/22	scaffold_12	-	11-32	N/A	-	miRBase_13_0	20/38	6/91
19	fru-mir-124-2	mir-124	fru-miR-124	22/22	scaffold_120	-	52-73	N/A	-	miRBase_13_0	47/65	8/135
20	fru-mir-24-1	mir-189	fru-miR-189	23/23	scaffold_122	+	16-38	N/A	-	miRBase_13_0	2/4	1/4
21	fru-mir-24-1	mir-24	fru-miR-24	22/22	scaffold_122	+	54-75	N/A	-	miRBase_13_0	19/35	5/74
22	fru-mir-23a-1	mir-23	fru-miR-23a	22/22	scaffold_122	+	56-77	N/A	-	miRBase_13_0	22/39	6/78
23	fru-mir-27e	mir-27	fru-miR-27e	22/22	scaffold_122	+	60-81	N/A	-	miRBase_13_0	22/38	6/81
24	fru-mir-107	mir-107	fru-miR-107	23/23	scaffold_124	+	52-74	N/A	-	miRBase_13_0	20/37	4/68
25	fru-mir-199-1	mir-199	fru-miR-199	23/23	scaffold_13	+	15-37	N/A	-	miRBase_13_0	22/39	7/87
26	fru-mir-214	mir-214	fru-miR-214	21/21	scaffold_13	+	65-85	N/A	-	miRBase_13_0	21/39	1/41
27	fru-mir-338	mir-338	fru-miR-338	22/22	scaffold_139	+	52-73	N/A	-	miRBase_13_0	12/22	4/36
28	fru-mir-199-3	mir-199	fru-miR-199	23/23	scaffold_139	-	17-39	N/A	-	miRBase_13_0	22/39	7/87
29	fru-mir-24-2	mir-24	fru-miR-24	22/22	scaffold_141	-	51-72	N/A	-	miRBase_13_0	19/35	5/74
30	fru-mir-23a-3	mir-23	fru-miR-23a	22/22	scaffold_141	-	53-74	N/A	-	miRBase_13_0	22/39	6/78
31	fru-mir-27c	mir-27	fru-miR-27c	21/21	scaffold_141	-	54-74	N/A	-	miRBase_13_0	22/38	6/81
32	fru-mir-200b	mir-200	fru-miR-200b	22/22	scaffold_147	-	50-71	N/A	-	miRBase_13_0	21/37	3/88
33	fru-mir-200a	mir-200	fru-miR-200a	22/22	scaffold_147	-	50-71	N/A	-	miRBase_13_0	21/37	3/88
34	fru-mir-429	mir-429	fru-miR-429	22/22	scaffold_147	-	51-72	N/A	-	miRBase_13_0	13/25	2/27
35	fru-mir-135a	mir-135	fru-miR-135a	22/22	scaffold_150	+	11-32	N/A	-	miRBase_13_0	21/39	6/118
36	fru-mir-132	mir-132	fru-miR-132	22/22	scaffold_156	-	54-75	N/A	-	miRBase_13_0	11/21	3/28
37	fru-mir-212	mir-212	fru-miR-212	21/21	scaffold_156	-	62-82	N/A	-	miRBase_13_0	11/15	3/21
38	fru-mir-184	mir-184	fru-miR-184	21/21	scaffold_159	-	53-73	N/A	-	miRBase_13_0	40/54	2/73
39	fru-let-7b	let-7	fru-let-7b	22/22	scaffold_177	+	6-27	N/A	-	miRBase_13_0	44/65	17/337
40	fru-let-7a-2	let-7	fru-let-7a	22/22	scaffold_2	+	4-25	N/A	-	miRBase_13_0	44/65	17/337
41	fru-mir-204	mir-204	fru-miR-204	22/22	scaffold_2	+	15-36	N/A	-	miRBase_13_0	20/29	1/38
42	fru-mir-190	mir-190	fru-miR-190	22/22	scaffold_2	-	6-27	N/A	-	miRBase_13_0	24/55	3/95
43	fru-let-7i	let-7	fru-let-7i	22/22	scaffold_2	-	6-27	N/A	-	miRBase_13_0	44/65	17/337
44	fru-let-7d	let-7	fru-let-7d	22/22	scaffold_22	-	15-36	N/A	-	miRBase_13_0	44/65	17/337
45	fru-mir-138	mir-138	fru-miR-138	22/22	scaffold_241	+	6-27	N/A	-	miRBase_13_0	14/29	3/56
46	fru-mir-194	mir-194	fru-miR-194	21/21	scaffold_242	-	8-28	N/A	-	miRBase_13_0	17/29	1/47
47	fru-mir-192	mir-192	fru-miR-192	21/21	scaffold_242	-	15-35	N/A	-	miRBase_13_0	12/20	2/25
48	fru-mir-218b	mir-218	fru-miR-218b	22/22	scaffold_243	+	11-32	N/A	-	miRBase_13_0	22/40	5/82
49	fru-mir-301	mir-301	fru-miR-301	22/22	scaffold_243	+	44-65	N/A	-	miRBase_13_0	14/32	2/60
50	fru-mir-130	mir-130	fru-miR-130	22/22	scaffold_243	+	52-73	N/A	-	miRBase_13_0	18/35	4/71
51	fru-mir-133	mir-133	fru-miR-133	22/22	scaffold_2477	-	52-73	N/A	-	miRBase_13_0	47/64	4/138
52	fru-mir-9-4	mir-9	fru-miR-9	23/23	scaffold_25	-	14-36	N/A	-	miRBase_13_0	41/59	9/206
53	fru-mir-193	mir-193	fru-miR-193	22/22	scaffold_26	-	50-71	N/A	-	miRBase_13_0	19/36	1/55
54	fru-mir-365	mir-365	fru-miR-365	22/22	scaffold_26	-	55-76	N/A	-	miRBase_13_0	16/32	2/57
55	fru-mir-153a	mir-153	fru-miR-153a	22/22	scaffold_260	+	45-66	N/A	-	miRBase_13_0	23/36	6/55
56	fru-mir-218a-2	mir-218	fru-miR-218a	22/22	scaffold_261	-	11-32	N/A	-	miRBase_13_0	22/40	5/82
57	fru-mir-181b-2	mir-181	fru-miR-181b	22/22	scaffold_264	+	11-32	N/A	-	miRBase_13_0	22/39	9/168
58	fru-mir-199-2	mir-199	fru-miR-199	23/23	scaffold_27	+	8-30	N/A	-	miRBase_13_0	22/39	7/87
59	fru-mir-142b	mir-142	fru-miR-142b	22/22	scaffold_271	+	15-36	N/A	-	miRBase_13_0	14/30	5/45
60	fru-mir-142a	mir-142	fru-miR-142a	21/21	scaffold_29	-	15-35	N/A	-	miRBase_13_0	14/30	5/45
61	fru-mir-140	mir-140	fru-miR-140	22/22	scaffold_30	-	3-24	N/A	-	miRBase_13_0	15/31	3/51
62	fru-mir-9-3	mir-9	fru-miR-9	23/23	scaffold_302	+	16-38	N/A	-	miRBase_13_0	41/59	9/206
63	fru-mir-26	mir-26	fru-miR-26	22/22	scaffold_311	+	15-36	N/A	-	miRBase_13_0	19/38	5/88
64	fru-mir-29b-2	mir-29	fru-miR-29b	22/22	scaffold_325	+	45-66	N/A	-	miRBase_13_0	28/46	5/165
65	fru-mir-29a-1	mir-29	fru-miR-29a	22/22	scaffold_325	+	45-66	N/A	-	miRBase_13_0	28/46	5/165
66	fru-mir-205	mir-205	fru-miR-205	22/22	scaffold_325	-	10-31	N/A	-	miRBase_13_0	19/38	2/48
67	fru-mir-458	mir-458	fru-miR-458	22/22	scaffold_3295	+	45-66	N/A	-	miRBase_13_0	5/9	1/10
68	fru-mir-125a	mir-125	fru-miR-125a	22/22	scaffold_37	-	9-30	N/A	-	miRBase_13_0	45/62	4/195
69	fru-mir-9-1	mir-9	fru-miR-9	23/23	scaffold_37	-	15-37	N/A	-	miRBase_13_0	41/59	9/206
70	fru-mir-489	mir-489	fru-miR-489	23/23	scaffold_37	-	62-84	N/A	-	miRBase_13_0	12/16	2/17
71	fru-mir-29b-1	mir-29	fru-miR-29b	22/22	scaffold_371	-	50-71	N/A	-	miRBase_13_0	28/46	5/165
72	fru-mir-29a-2	mir-29	fru-miR-29a	22/22	scaffold_371	-	84-105	N/A	-	miRBase_13_0	28/46	5/165
73	fru-mir-10d	mir-10	fru-miR-10d	25/25	scaffold_39	+	28-52	N/A	-	miRBase_13_0	43/59	7/124
74	fru-mir-9-2	mir-9	fru-miR-9	23/23	scaffold_4	+	8-30	N/A	-	miRBase_13_0	41/59	9/206
75	fru-mir-196b	mir-196	fru-miR-196b	22/22	scaffold_41	+	8-29	N/A	-	miRBase_13_0	20/38	6/91
76	fru-mir-10c	mir-10	fru-miR-10c	22/22	scaffold_41	+	15-36	N/A	-	miRBase_13_0	43/59	7/124
77	fru-mir-181a-2	mir-181	fru-miR-181a	23/23	scaffold_41	+	22-44	N/A	-	miRBase_13_0	22/39	9/168
78	fru-mir-152	mir-152	fru-miR-152	22/22	scaffold_41	+	45-66	N/A	-	miRBase_13_0	11/27	3/43
79	fru-mir-101b	mir-101	fru-miR-101b	22/22	scaffold_413	-	52-73	N/A	-	miRBase_13_0	23/40	4/76
80	fru-mir-15a	mir-15	fru-miR-15a	22/22	scaffold_42	-	13-34	N/A	-	miRBase_13_0	23/37	4/69
81	fru-mir-16	mir-16	fru-miR-16	22/22	scaffold_42	-	13-34	N/A	-	miRBase_13_0	23/38	2/61
82	fru-mir-181b-1	mir-181	fru-miR-181b	22/22	scaffold_43	-	14-35	N/A	-	miRBase_13_0	22/39	9/168
83	fru-mir-181a-1	mir-181	fru-miR-181a	23/23	scaffold_43	-	14-36	N/A	-	miRBase_13_0	22/39	9/168
84	fru-mir-181a-1	mir-181	fru-miR-181a*	22/22	scaffold_43	-	55-76	N/A	-	miRBase_13_0	22/39	9/168
85	fru-mir-122	mir-122	fru-miR-122	22/22	scaffold_44	+	6-27	N/A	-	miRBase_13_0	15/27	1/31
86	fru-mir-128-2	mir-128	fru-miR-128	22/22	scaffold_45	-	44-65	N/A	-	miRBase_13_0	19/36	2/66
87	fru-mir-187	mir-187	fru-miR-187	20/20	scaffold_45	-	63-82	N/A	-	miRBase_13_0	17/29	2/32
88	fru-mir-153b	mir-153	fru-miR-153b	22/22	scaffold_46	+	50-71	N/A	-	miRBase_13_0	23/36	6/55
89	fru-mir-455	mir-455	fru-miR-455	22/22	scaffold_49	+	15-36	N/A	-	miRBase_13_0	12/26	3/31
90	fru-mir-126	mir-126	fru-miR-126	21/21	scaffold_49	+	43-63	N/A	-	miRBase_13_0	15/22	1/23
91	fru-mir-218a-1	mir-218	fru-miR-218a	22/22	scaffold_5	-	11-32	N/A	-	miRBase_13_0	22/40	5/82
92	fru-mir-103	mir-103	fru-miR-103	23/23	scaffold_5	-	50-72	N/A	-	miRBase_13_0	21/38	5/118
93	fru-mir-25	mir-25	fru-miR-25	22/22	scaffold_5	-	51-72	N/A	-	miRBase_13_0	17/28	1/31
94	fru-mir-22b	mir-22	fru-miR-22b	22/22	scaffold_50	-	55-76	N/A	-	miRBase_13_0	23/37	5/51
95	fru-mir-144	mir-144	fru-miR-144	20/20	scaffold_511	+	47-66	N/A	-	miRBase_13_0	17/30	2/32
96	fru-mir-202	mir-202	fru-miR-202	22/22	scaffold_52	-	43-64	N/A	-	miRBase_13_0	10/23	2/30
97	fru-mir-219-2	mir-219	fru-miR-219	22/22	scaffold_523	-	8-29	N/A	-	miRBase_13_0	38/52	4/89
98	fru-mir-135b	mir-135	fru-miR-135b	22/22	scaffold_54	-	16-37	N/A	-	miRBase_13_0	21/39	6/118
99	fru-mir-101a	mir-101	fru-miR-101a	22/22	scaffold_55	-	47-68	N/A	-	miRBase_13_0	23/40	4/76
100	fru-let-7j	let-7	fru-let-7j	22/22	scaffold_56	-	4-25	N/A	-	miRBase_13_0	44/65	17/337
101	fru-mir-100	mir-100	fru-miR-100	22/22	scaffold_6	+	5-26	N/A	-	miRBase_13_0	39/56	3/88
102	fru-let-7a-1	let-7	fru-let-7a	22/22	scaffold_6	+	6-27	N/A	-	miRBase_13_0	44/65	17/337
103	fru-mir-125b	mir-125	fru-miR-125b	22/22	scaffold_6	+	8-29	N/A	-	miRBase_13_0	45/62	4/195
104	fru-mir-223	mir-223	fru-miR-223	21/21	scaffold_6	+	48-68	N/A	-	miRBase_13_0	18/31	2/34
105	fru-mir-30b	mir-30	fru-miR-30b	22/22	scaffold_61	-	16-37	N/A	-	miRBase_13_0	21/38	7/186
106	fru-mir-30d	mir-30	fru-miR-30d	22/22	scaffold_61	-	21-42	N/A	-	miRBase_13_0	21/38	7/186
107	fru-mir-128-1	mir-128	fru-miR-128	22/22	scaffold_64	-	51-72	N/A	-	miRBase_13_0	19/36	2/66
108	fru-let-7h	let-7	fru-let-7h	22/22	scaffold_66	-	6-27	N/A	-	miRBase_13_0	44/65	17/337
109	fru-let-7g	let-7	fru-let-7g	22/22	scaffold_66	-	6-27	N/A	-	miRBase_13_0	44/65	17/337
110	fru-mir-10b-2	mir-10	fru-miR-10b	23/23	scaffold_66	-	13-35	N/A	-	miRBase_13_0	43/59	7/124
111	fru-mir-196a-1	mir-196	fru-miR-196a	22/22	scaffold_66	-	16-37	N/A	-	miRBase_13_0	20/38	6/91
112	fru-mir-460	mir-460	fru-miR-460	22/22	scaffold_68	+	43-64	N/A	-	miRBase_13_0	5/12	2/19
113	fru-mir-1	mir-1	fru-miR-1	22/22	scaffold_68	+	49-70	N/A	-	miRBase_13_0	41/61	3/166
114	fru-mir-219-1	mir-219	fru-miR-219	22/22	scaffold_7	-	1-22	N/A	-	miRBase_13_0	38/52	4/89
115	fru-let-7a-3	let-7	fru-let-7a	22/22	scaffold_7484	+	6-27	N/A	-	miRBase_13_0	44/65	17/337
116	fru-mir-129-2	mir-129	fru-miR-129	22/22	scaffold_8	-	6-27	N/A	-	miRBase_13_0	14/32	4/69
117	fru-mir-183	mir-183	fru-miR-183	23/23	scaffold_8	-	6-28	N/A	-	miRBase_13_0	25/42	2/51
118	fru-mir-96	mir-96	fru-miR-96	23/23	scaffold_8	-	16-38	N/A	-	miRBase_13_0	22/32	2/38
119	fru-mir-182	mir-182	fru-miR-182	21/21	scaffold_8	-	47-67	N/A	-	miRBase_13_0	18/34	3/50
120	fru-mir-23a-2	mir-23	fru-miR-23a	22/22	scaffold_80	+	48-69	N/A	-	miRBase_13_0	22/39	6/78
121	fru-mir-222	mir-222	fru-miR-222	24/24	scaffold_81	+	44-67	N/A	-	miRBase_13_0	14/31	2/40
122	fru-mir-221	mir-221	fru-miR-221	23/23	scaffold_81	+	47-69	N/A	-	miRBase_13_0	18/27	3/31
123	fru-mir-375	mir-375	fru-miR-375	22/22	scaffold_83	+	49-70	N/A	-	miRBase_13_0	21/44	3/50
124	fru-mir-216a	mir-216	fru-miR-216a	22/22	scaffold_86	-	7-28	N/A	-	miRBase_13_0	24/39	2/67
125	fru-mir-216b	mir-216	fru-miR-216b	22/22	scaffold_86	-	9-30	N/A	-	miRBase_13_0	24/39	2/67
126	fru-mir-217	mir-217	fru-miR-217	22/22	scaffold_86	-	27-48	N/A	-	miRBase_13_0	20/37	2/47
127	fru-mir-203	mir-203	fru-miR-203	22/22	scaffold_88	+	46-67	N/A	-	miRBase_13_0	12/21	2/25
128	fru-mir-15b	mir-15	fru-miR-15b	22/22	scaffold_9	-	20-41	N/A	-	miRBase_13_0	23/37	4/69
129	fru-mir-22a	mir-22	fru-miR-22a	22/22	scaffold_9	-	55-76	N/A	-	miRBase_13_0	23/37	5/51
130	fru-mir-137	mir-137	fru-miR-137	22/22	scaffold_9069	-	45-66	N/A	-	miRBase_13_0	24/47	3/69
131	fru-let-7e	let-7	fru-let-7e	22/22	scaffold_93	-	15-36	N/A	-	miRBase_13_0	44/65	17/337
132	fru-mir-124-1	mir-124	fru-miR-124	22/22	scaffold_95	+	51-72	N/A	-	miRBase_13_0	47/65	8/135
133	fru-mir-21	mir-21	fru-miR-21	23/23	scaffold_99	+	8-30	N/A	-	miRBase_13_0	20/35	2/41
Total	133 record(s).

miRNA Series

Links